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Lint: pulmonary-haemophilus-influenzae-infection

Emphasis
warning

"Pulmonary haemophilus influenzae (Hi) infection refers to infection of lung with Haemophilus influenzae, a small gram-negative cocco-bacillus."

Line 1:102 · Italics should be used only in exceptional circumstances: '<em>Haemophilus influenzae,</em>'

"Haemophilus (from the Greek, ‘blood-loving’) requires erythrocyte factors for growth. Haemophilus influenzae was first isolated in the 1890s and was so named because it was erroneously thought to be the cause of the 1918-1920 influenza pandemic (viruses were unknown before the 1930s)."

Line 3:4 · Italics should be used only in exceptional circumstances: '<em>Haemophilus </em>(from the Greek, ‘blood-loving’) requires erythrocyte factors for growth. <em>Haemophilus influenzae</em>'

"The organism frequently colonises the human upper respiratory tract, especially the nasopharynx, and is considered to form part of the normal respiratory flora. Most H. influenzae pneumonias are the result of direct extension from the nasopharynx to the lower respiratory tract."

Line 21:184 · Italics should be used only in exceptional circumstances: '<em>H. influenzae</em>'

"Encapsulated (typeable) strains such as serotype b (Hib) and, increasingly, serotype a (Hia) cause invasive disease such as bacteraemic pneumonia, especially in children and immunocompromised adults 5 . Historically, H. influenzae type b (Hib), the most virulent strain, was the cause of ~95% of invasive disease. The Hib polysaccharide capsule is the main virulence factor of this strain. Conjugate vaccine has reduced the incidence of Hib, almost eliminating Hib meningitis."

Line 22:232 · Italics should be used only in exceptional circumstances: '<em>H</em>. <em>influenzae </em>'

"Non-invasive CAP has a good prognosis however H. influenzae pneumonia can progress to invasive disease, with a case-fatality rate for invasive Hia pneumonia around 7-8% 5. Bacteraemia can lead to sepsis, empyema, pericarditis, endocarditis, peritonitis, osteomyelitis and septic arthritis."

Line 37:50 · Italics should be used only in exceptional circumstances: '<em>H. influenzae</em>'
Acronyms
warning

"These common infections can exacerbate chronic obstructive pulmonary disease and are a common cause of community- and hospital-acquired pneumonia (CAP and HAP) and ventilator-associated pneumonia (VAP). Risk factors for pneumonia include age over 65 years, smoking, chronic lung disease, alcohol use, diabetes and heart disease."

Line 7:166 · 'HAP' has no definition. Spell it out if it's unfamiliar to the audience.

"molecular methods such as PCR or 16S rRNA sequencing"

Line 11:34 · 'PCR' has no definition. Spell it out if it's unfamiliar to the audience.
EG List And
warning

"Since, non-encapsulated (non-typeable, NTHi) strains have become the most common pathogenic strains in vaccinated populations and they commonly colonise the nasopharynx. They form biofilms, a structural barrier to antibiotics. Various infectious manifestations occur either by contiguous non-invasive spread (e.g. otitis media, sinusitis and pneumonia without bacteraemia) or invasive disease involving sterile sites. Invasive disease usually begins with bacteraemia which can lead to sepsis, meningitis, empyema, etc."

Line 23:313 · An e.g. list gives selected examples, so it should not end with 'and' or 'or': 'e.g. otitis media, sinusitis and'.
Oxford Comma
suggestion

"These common infections can exacerbate chronic obstructive pulmonary disease and are a common cause of community- and hospital-acquired pneumonia (CAP and HAP) and ventilator-associated pneumonia (VAP). Risk factors for pneumonia include age over 65 years, smoking, chronic lung disease, alcohol use, diabetes and heart disease."

Line 7:307 · Use the Oxford comma in 'use, diabetes and heart'.

"acute onset of fever, chills and rigors"

Line 15:23 · Use the Oxford comma in 'fever, chills and rigors'.

"Non-invasive CAP has a good prognosis however H. influenzae pneumonia can progress to invasive disease, with a case-fatality rate for invasive Hia pneumonia around 7-8% 5. Bacteraemia can lead to sepsis, empyema, pericarditis, endocarditis, peritonitis, osteomyelitis and septic arthritis."

Line 37:265 · Use the Oxford comma in 'peritonitis, osteomyelitis and septic'.
Parentheses
suggestion

"Encapsulated (typeable) strains such as serotype b (Hib) and, increasingly, serotype a (Hia) cause invasive disease such as bacteraemic pneumonia, especially in children and immunocompromised adults 5 . Historically, H. influenzae type b (Hib), the most virulent strain, was the cause of ~95% of invasive disease. The Hib polysaccharide capsule is the main virulence factor of this strain. Conjugate vaccine has reduced the incidence of Hib, almost eliminating Hib meningitis."

Line 22:17 · Use parentheses judiciously. There are at least 3 sets in this paragraph.